PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07890.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 606aa MW: 66677.7 Da PI: 6.773

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.9	4.9e-29	222	278	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK v+g+e++rsYY+Ct++ C++kk+vers+ d+++++i+Y g+H+h+ PHU07890.1 222 EDGYNWRKYGQKLVRGNEYTRSYYKCTYPICQAKKQVERSH-DGHITDIHYIGKHEHP 278 7**************************************.*************8 PP
2	WRKY	99.9	1.5e-31	400	457	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg +WrKYGqK vkg+++prsYYrC+ agCpvkk+ver+++dpkvv++tYeg+H h+ PHU07890.1 400 NDGQRWRKYGQKIVKGNPNPRSYYRCSVAGCPVKKHVERASHDPKVVITTYEGQHVHN 457 8*******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MGTPKEETTD EVFSENLEQK PEPDPATKSE LKEKRSFEST SADVVSGELQ KRLSPDADKQ 60 ASKNNEEEST YPPTGQEVSR ISQCDKGINV SQSNQEDISL SRVQENPSEN VGQLQVLKSE 120 AGASGSSQLS SLPKDSDAKS CGSESGVKRL SGKASDSSDQ MQSSNTEILL SQSDQQRVNY 180 PIQKREKALD KLQPRRNPDT SVHGLTSDQG VTLLRVPEKP SEDGYNWRKY GQKLVRGNEY 240 TRSYYKCTYP ICQAKKQVER SHDGHITDIH YIGKHEHPET PSGPQMLPEL VLPLQMKQPE 300 IPIISTLEAE GEKSTRPQET CEPSKPSEAP LVLDIVSACG GVKGTPLKRH KSETEVDKDD 360 GSDSKRQKKD IVATVDTPPI KSQSEPRHIV QTVSEVDIIN DGQRWRKYGQ KIVKGNPNPR 420 SYYRCSVAGC PVKKHVERAS HDPKVVITTY EGQHVHNFPT PRDISQISPV PDVVTTAIRT 480 DSRIESGHKH VVESKSESGE RKHVGDSRTE LGENKHIEKS KPELGGNKHV GDSKSESGES 540 RHIGKSKIES GENKHVGGSR IESGGNKHVE ESKPELGGNK HVGESIPESA ENKHVGLDMA 600 VHIGAN

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MGTPKEETTD EVFSENLEQK PEPDPATKSE LKEKRSFEST SADVVSGELQ KRLSPDADKQ  60
ASKNNEEEST YPPTGQEVSR ISQCDKGINV SQSNQEDISL SRVQENPSEN VGQLQVLKSE  120
AGASGSSQLS SLPKDSDAKS CGSESGVKRL SGKASDSSDQ MQSSNTEILL SQSDQQRVNY  180
PIQKREKALD KLQPRRNPDT SVHGLTSDQG VTLLRVPEKP SEDGYNWRKY GQKLVRGNEY  240
TRSYYKCTYP ICQAKKQVER SHDGHITDIH YIGKHEHPET PSGPQMLPEL VLPLQMKQPE  300
IPIISTLEAE GEKSTRPQET CEPSKPSEAP LVLDIVSACG GVKGTPLKRH KSETEVDKDD  360
GSDSKRQKKD IVATVDTPPI KSQSEPRHIV QTVSEVDIIN DGQRWRKYGQ KIVKGNPNPR  420
SYYRCSVAGC PVKKHVERAS HDPKVVITTY EGQHVHNFPT PRDISQISPV PDVVTTAIRT  480
DSRIESGHKH VVESKSESGE RKHVGDSRTE LGENKHIEKS KPELGGNKHV GDSKSESGES  540
RHIGKSKIES GENKHVGGSR IESGGNKHVE ESKPELGGNK HVGESIPESA ENKHVGLDMA  600
VHIGAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	8e-69	WRKY family protein