PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU07775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 479aa MW: 53659 Da PI: 6.2429 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 6.7e-17 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l ++vk++G g+W+++ r g+ R++k+c++rw ++l PHU07775.1 29 KGPWTTTEDAILMEYVKKHGEGNWNAVQRNSGLMRCGKSCRLRWANHL 76 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 82 | 125 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++ +E+ l+v+++++lG++ W++ a+ ++ gRt++++k++w++ PHU07775.1 82 KGAFSIDEERLIVELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 125 7899******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence |
MAPNGGGVNK NNNGTSIGRN HNTRQVLKKG PWTTTEDAIL MEYVKKHGEG NWNAVQRNSG 60 LMRCGKSCRL RWANHLRPHL KKGAFSIDEE RLIVELHAKL GNKWARMAAQ LPGRTDNEIK 120 NYWNTRLKRR QRAGLPIYPQ DIQPQNYQQD QNQQHSTNIP SPFDNNHQNS NYNNNNSPLS 180 LLDIFNPSTM KPSRNIIPHQ YQFNNNNPTS SFLTNTNNIN NQVKFFRDPR VSLSLTLASS 240 MKNSQLPSMI APVPNNFSQG YSSSIPAPPL QHNYPNFTTT TRPFPGISSN PNGLILGMGT 300 EQRSIQLSMP ETTTTTTSSD HADNNYVVER GLSRGNSGLL EDLLEESQTL TRGEKIEENC 360 NVDNEDNKGK LVWEEYGLTE EAADAILTEE STYNFAHTDD NNATQSKHSE DSSSLNSSSG 420 ITTKEASLEL GNQVDDDIMR FLDNFPLGVP VPDWCDDQQN TSNAQSFECD QIQLSKSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 5e-68 | MYB family protein |