PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 361aa MW: 41297 Da PI: 9.636 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5.2e-15 | 4 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW eEd ll +v+q+G++ W++++++m+ ++R +k+c +rw +yl PHU06850.1 4 RQRWRSEEDALLRAYVRQYGPKEWHLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.6 | 5.1e-12 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + PHU06850.1 59 KGSLTEEEQHLVIQLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788******************.*********.*****999999766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MRERQRWRSE EDALLRAYVR QYGPKEWHLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQHLV IQLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKVVDP 120 VDEGKYDHIL ETFAEKIVKE RSVPGLLMAT SNGGFLHTDA PTSTPQTLLP PWLSNSSAPS 180 TVRSSSPSVT LSLSPSTVPP TPTPSIPWLQ TDRGPENAPL ILTSFPHHGV APPCGENPFI 240 TELAECCKEL DEGHRSWTAH KKEAAWRLRR VELQLESEKA NKVREKMEEI EAKMKALREE 300 QKATLDRIDA EYKDQLAGLR RDAEAKEQKL AEQWASKHLR LAKFLEQMGC QSRLAEPNGG 360 R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 1e-144 | MYB family protein |