PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06503.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 208aa MW: 22305.1 Da PI: 7.5038

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.6	3.2e-36	51	148	4	89
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...........k 89 + ++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ + ++tieWLl++a+pai+++tgt++ +++++ ++ s s s+s+ss + PHU06503.1 51 ANTKTKDRHTKVNGRGRRVRMPALCAARVFQLTKELGHRTEGETIEWLLRKAEPAIIAATGTGTVPETQVtTTPSMSLSQSQSSVLapltmatpvsgS 148 5689**********************************************************999987775333333333322222344444444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MGSEMVLNHQ FPVSGTPSGG AASTTIHSEP NDRNALAVAV IPKKKNSLSV ANTKTKDRHT 60 KVNGRGRRVR MPALCAARVF QLTKELGHRT EGETIEWLLR KAEPAIIAAT GTGTVPETQV 120 TTTPSMSLSQ SQSSVLAPLT MATPVSGSAN CGSYYSGFYS QQQPNCRLDL EYSGNPYRNM 180 PFTALLLEPV NADDECEEKV AGGEHVVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	4e-35	TCP family protein