PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU04786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 140aa MW: 15750.4 Da PI: 10.7152 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.4 | 8.7e-19 | 74 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+A Irdp+ r +r++lg f tae+Aaka++ a+ +++g PHU04786.1 74 NYRGVRQRP-WGKWAAKIRDPR----RaARVWLGIFTTAEDAAKAYDIAAIEFRG 123 59*******.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MTTTMTSATI ASPSKNMSNF VEPPLFCVPT KPEPCQFCKI NGCLRCNYFG TLVAVDNKNN 60 KAKIAAIKKK KKKNYRGVRQ RPWGKWAAKI RDPRRAARVW LGIFTTAEDA AKAYDIAAIE 120 FRGPKAKLNF SFADYTPIQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 6e-24 | ERF family protein |