PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04568.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 466aa MW: 51482.1 Da PI: 6.7965

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.8e-13	285	330	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +K++Ka+ L Av YI++L PHU04568.1 285 NHVEAERQRREKLNHRFYALRSVVPHV-----TKMDKASLLSDAVAYINEL 330 799*********************8.....8*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDELIVSSSS SSSSFFIPSL LSQGNQTSST LQQMLQHILK IQTDSWAYAI FWQTSNDDDG 60 RLFLAWGDGH FHVTKVKKGG VVCANKASSV ERKNVIKGLQ ALICENGDNN GVVEGDGDGD 120 VTDAEWFYVM SLAQSFSIGD GVPGKAFSSG SFVWLNGAQL LEFSNCERAK EAHVHGIETL 180 VCIPTSTGVL ELGSSELIKE NWNLVQQVKT LFNSNQENVN YIGLQENYNN NTRRKAKAAG 240 ETTSIFQDSD QSDSDCQVLM EKPVEKKTPK KRGRKPGASR ETPLNHVEAE RQRREKLNHR 300 FYALRSVVPH VTKMDKASLL SDAVAYINEL KSKVDELKVQ LSTKPKKMKI ESMDSTNLDN 360 HSTTTTTTSV NQIRPNSSSV ASFGIPNNWK VEVEVKILGP DAMIRVQSEN VNYPSARLMR 420 ALQDLELHVH HASISSVNDL MLQDIVVKVP IGLGTEDGLK IALLRS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDELIVSSSS SSSSFFIPSL LSQGNQTSST LQQMLQHILK IQTDSWAYAI FWQTSNDDDG  60
RLFLAWGDGH FHVTKVKKGG VVCANKASSV ERKNVIKGLQ ALICENGDNN GVVEGDGDGD  120
VTDAEWFYVM SLAQSFSIGD GVPGKAFSSG SFVWLNGAQL LEFSNCERAK EAHVHGIETL  180
VCIPTSTGVL ELGSSELIKE NWNLVQQVKT LFNSNQENVN YIGLQENYNN NTRRKAKAAG  240
ETTSIFQDSD QSDSDCQVLM EKPVEKKTPK KRGRKPGASR ETPLNHVEAE RQRREKLNHR  300
FYALRSVVPH VTKMDKASLL SDAVAYINEL KSKVDELKVQ LSTKPKKMKI ESMDSTNLDN  360
HSTTTTTTSV NQIRPNSSSV ASFGIPNNWK VEVEVKILGP DAMIRVQSEN VNYPSARLMR  420
ALQDLELHVH HASISSVNDL MLQDIVVKVP IGLGTEDGLK IALLRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	3e-79	bHLH family protein