PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU04259.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 311aa MW: 34625.7 Da PI: 9.7828 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.8 | 1e-27 | 94 | 148 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+ave+L G +kA+P++ilelm +gLt++h++SHLQkYR + PHU04259.1 94 KVKVDWTPELHRRFVKAVEKL-GVDKAVPSRILELMATDGLTRHHIASHLQKYRAH 148 5689*****************.********************************86 PP | |||||||
2 | Myb_DNA-binding | 43.3 | 8.5e-14 | 97 | 146 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av++lG + +++I + m g+t+ ++ s++qky+ PHU04259.1 97 VDWTPELHRRFVKAVEKLGVDkaVPSRILELMAtDGLTRHHIASHLQKYR 146 57***********************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 311 aa Download sequence |
MLVVSTPLSY KNERGNYDLF QDFPDGNLID TIDFDDFFEG INDGDLLQNL KILDEFDISK 60 NNTTTNLNVK TKSKENDKSK KSSSQIKNPE GKKKVKVDWT PELHRRFVKA VEKLGVDKAV 120 PSRILELMAT DGLTRHHIAS HLQKYRAHRK HLLAREAEAA SWTQRKQMYG GATAIGGGGK 180 RVIMNPWSAP PTMGFPPMAH HIRPLHVWGH PYVNNSFWHP HYRVPNSLAP GTPCFPSPTR 240 FAAPLMVPGV PPPIASGQTP HLHLTKESID AAIEDVLSKP QTPLPIGLKP PSIDSVLNEL 300 QCQGITKIPP T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G20570.1 | 3e-59 | G2-like family protein |