PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04098.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 760aa MW: 82646.4 Da PI: 7.2789

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.1	2e-24	307	364	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGq + +g ++prsYY+C++++Cpvkk+v + d +v+ei+Y+g Hnh+k PHU04098.1 307 EDGYNWRKYGQNQANGRTYPRSYYKCAYPKCPVKKRVGGYH-DCQVMEIIYKGIHNHPK 364 8************************************99.*************85 PP
2	WRKY	81.8	7.2e-26	517	580	2	59
--SS-EEEEEEE--TT-SS-......EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefp......rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK+vkg+++p rsYY+Cts+gC+v+k+++rs d+k v++tY g+H he PHU04098.1 517 DDGYRWRKYGQKVVKGNPNPrllpfaRSYYKCTSSGCNVRKHIQRSPYDQKSVITTYDGKHYHE 580 8**************9984444446**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MGGFDDHVAI FGDWITPSPS PRAFVSSLLV DDVGGWLPLM EHTNESNCRN FNAEPQQNVT 60 ALCSTDGKDG ARAGASTDQT VKSSAPSEQK PSTRGGGLME RMVARSGFHA PRLNTDGLRP 120 PVLSQNQEAR SPYLTIPPGL SPSVLLYSPV LIYNPLVCPS PTTGLLPLAS GDESKSLMLT 180 AGIADKRKET AFGSNTSSSF SSNPVNPSSD LSQQLLPQIE VSAHPNNSLQ PQSMEVTQSK 240 QIRHGTSKFP MLSTEEDFRG SHIKPEVRPF NIVGGSMQHS QTLDEQKDED TKQRGGGDSK 300 DVNPPAEDGY NWRKYGQNQA NGRTYPRSYY KCAYPKCPVK KRVGGYHDCQ VMEIIYKGIH 360 NHPKPLSNPI SALGSLNSFG DVQLDNVDPS GTGFNSELAL ATSQQGPTAK GLMWSNNKLE 420 ATSLAALHSE YCSGSTTLQY KGAQQGSADA VEVSSVLSND EDDHGTRGSV LLGYDGAEDE 480 FEPKRRKSTV SDTSGTIRAI REPRVVVHTI SEVDIIDDGY RWRKYGQKVV KGNPNPRLLP 540 FARSYYKCTS SGCNVRKHIQ RSPYDQKSVI TTYDGKHYHE VPPARTSSQG SSGASKSPSN 600 PITTDAQSHV GRPEPTQVQN TKPAQVQNTK STQVQNTNER YGRAPQVQNT NERYGRAPQV 660 QNTNERYGRA PSLGSAGPIS GFDSFGTNEQ QDLSSLAMAG FNSNQHQFSV PLNPYIGWQR 720 PVNDAGFVLP EGEAMPDPNL NYSNGSSTYQ QIMNGLPPQM

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MGGFDDHVAI FGDWITPSPS PRAFVSSLLV DDVGGWLPLM EHTNESNCRN FNAEPQQNVT  60
ALCSTDGKDG ARAGASTDQT VKSSAPSEQK PSTRGGGLME RMVARSGFHA PRLNTDGLRP  120
PVLSQNQEAR SPYLTIPPGL SPSVLLYSPV LIYNPLVCPS PTTGLLPLAS GDESKSLMLT  180
AGIADKRKET AFGSNTSSSF SSNPVNPSSD LSQQLLPQIE VSAHPNNSLQ PQSMEVTQSK  240
QIRHGTSKFP MLSTEEDFRG SHIKPEVRPF NIVGGSMQHS QTLDEQKDED TKQRGGGDSK  300
DVNPPAEDGY NWRKYGQNQA NGRTYPRSYY KCAYPKCPVK KRVGGYHDCQ VMEIIYKGIH  360
NHPKPLSNPI SALGSLNSFG DVQLDNVDPS GTGFNSELAL ATSQQGPTAK GLMWSNNKLE  420
ATSLAALHSE YCSGSTTLQY KGAQQGSADA VEVSSVLSND EDDHGTRGSV LLGYDGAEDE  480
FEPKRRKSTV SDTSGTIRAI REPRVVVHTI SEVDIIDDGY RWRKYGQKVV KGNPNPRLLP  540
FARSYYKCTS SGCNVRKHIQ RSPYDQKSVI TTYDGKHYHE VPPARTSSQG SSGASKSPSN  600
PITTDAQSHV GRPEPTQVQN TKPAQVQNTK STQVQNTNER YGRAPQVQNT NERYGRAPQV  660
QNTNERYGRA PSLGSAGPIS GFDSFGTNEQ QDLSSLAMAG FNSNQHQFSV PLNPYIGWQR  720
PVNDAGFVLP EGEAMPDPNL NYSNGSSTYQ QIMNGLPPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-88	WRKY family protein