PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03871.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 337aa    MW: 37126.6 Da    PI: 9.5057
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.81.7e-19222255134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C +tkTp+WR+gp g+k+LCnaCG++yr+ +
  PHU03871.1 222 CTHCEVTKTPQWREGPLGPKSLCNACGVRYRSGR 255
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTMVEHGGYM DGSPNDPIVD DDFEDILNFL DFPMENLEED GVGVEWDSSE SKFLGPIPTE  60
ALMSFPPMPQ GNIRNGRVNA VANSRPTIKF TEVQGTTGTF QTQSPVSVLE GSNSCSGGKS  120
IPIKPIKHDT VIPVRPRSKR ARPSAVNPWV LMAPISSTRV ASKKICDAKK GKEKKRRLPI  180
LSGAKESTTC YVQQINDTVP QIPDVSKKKI TSTQQSSLVK KCTHCEVTKT PQWREGPLGP  240
KSLCNACGVR YRSGRLFPEY RPAASPTFVP SVHSNSHRKV VEMRKKSIYG GAVVEEPPKM  300
IIGRKRKALP EPTIVDDPPM SPAPEFVPMS SYLFDVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-43GATA family protein