PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03378.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 290aa    MW: 32214.2 Da    PI: 4.4895
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1759109155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVrw++ + +Wv+e+r+p   gk+ r++lg+f tae+Aa+a++ a  +l+g
  PHU03378.1  59 PVYRGVRWRH-SEKWVSEVRVP---GKKSRIWLGTFPTAEMAARAHDVAVMALKG 109
                 68********.7*********8...557*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDIFGNLYFD PLPPTSSICD SNGSCGKANS SNEEVVLLLA SNNTKRRGGR KKLRETRHPV  60
YRGVRWRHSE KWVSEVRVPG KKSRIWLGTF PTAEMAARAH DVAVMALKGR SACLNFADSA  120
WRLPVPASAA TKDIQMAAAE AAEAFRLSKF TEGENSEEVT TNDQVITQYS VDSTNWRLPT  180
PTSAAAKDIQ NAAAEVAEAF RLSESSEGEN SEEVIIVDQV TQDIVIAELP DYNMLFMDEE  240
ELFYMPGLLA NMAEGLMLPP PPPPQCIDGY DNSYHMEPDD IDMSLWSYRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.14e-49ERF family protein