PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02779.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 268aa    MW: 30099.3 Da    PI: 6.9878
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025124146123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C k F ++  L  H++ H
  PHU02779.1 124 FECQYCFKQFANSQALGGHQNAH 146
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAKDVVSSTF QSPSSNINGE NDHEPSSKSC VENNKRLKIF GFELGQSDAL KLPLCTGSGE  60
EPDHKLGFEL IDPKKSPKEI QDISSKEDQE SVNSSSASTI SSGNIRDHQE KILASSNEEL  120
LKKFECQYCF KQFANSQALG GHQNAHKKER MRKKRLQLQA RKASLSCYLQ PFHHQNYNNN  180
NNIINYQVYD PQFTVYEESQ ISFSPYDNQD YQVSSTGGKW PFHQESNCTF TLTHGGNYMK  240
PPSTSLANSA TEQKSSCKPL DLQLGLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.13e-14C2H2 family protein