PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02621.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HD-ZIP
Protein Properties Length: 296aa    MW: 34036.7 Da    PI: 4.5471
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02621.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-1880133356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k++++ ++q++ Le+ Fe +++++ e++ +LA++lgL+ rq+ +WFqNrRa++k
  PHU02621.1  80 KKRRLLPNQVQFLEKSFEVDNKLDPERKVQLANELGLQPRQIAIWFQNRRARYK 133
                 45578899*********************************************9 PP
2HD-ZIP_I/II123.69.5e-4079170192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrl  +qv++LE+sFe ++kL+perKv+la+eLglqprq+a+WFqnrRAR+ktk lEkdy++Lk+++d+lk++ ++L ke+e+Lr+e++
   PHU02621.1  79 EKKRRLLPNQVQFLEKSFEVDNKLDPERKVQLANELGLQPRQIAIWFQNRRARYKTKVLEKDYDVLKASFDKLKADYDNLFKENEDLRNEVN 170
                  69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEVGGVINGS SNTVLFPSEK LSNCLWMSNS SPSFHGSASM VNFEDGGRGE IAKERPFFPA  60
IDKEETGNDD YDSCFHHPEK KRRLLPNQVQ FLEKSFEVDN KLDPERKVQL ANELGLQPRQ  120
IAIWFQNRRA RYKTKVLEKD YDVLKASFDK LKADYDNLFK ENEDLRNEVN LLTEKLHRRE  180
KGKENSEQIE PIDAQEAQKA TPIVFTSNVP SIPKLVWKQE DASSAKSDVI DSDSPHYTDG  240
IHSSNVFEPE PSDFSQDDDE NLSKSFLCFP EIGDQIQYNS CNLNFQIEDQ PCWFWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-49HD-ZIP family protein