PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02552.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 366aa MW: 40673.5 Da PI: 6.9871

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.8	9.3e-39	74	180	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 +kk +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+ ++ + s+ sa +++ + PHU02552.1 74 QAKKGTTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANYSSLNISVRSARHHTTSasnylahnnfgh 172 57999***********************************************************99999777333333333333333233443333334 PP TCP 89 .......k 89 PHU02552.1 173 vhhdqnyF 180 44433340 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
METGHHHHDN IRNSLQRPNF PLELLEKRDQ DHTICSNSSL FHPTLHMTTS STYDTICVDD 60 QKPKNQEEPN KIKQAKKGTT KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI 120 EWLLQQAEPA VIAATGTGTI PANYSSLNIS VRSARHHTTS ASNYLAHNNF GHVHHDQNYF 180 NGMGLFSSEN SFFPSGNLNV HAMLQAKEEL CDNRDQVDNN DDNIGRIKRR SEDQDLLQNH 240 QMGNLLQSST YGSIPASHQI GQNPATTLYM MTNNTSTTTN NNSSHPDTSN CSMWASPSNN 300 IDNSTIRGGL LNFMNFHQPI LETRGGGGTA AEGQWGMLTA AMNNYRQSDH ASGSNLHSGA 360 DDHHHS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

METGHHHHDN IRNSLQRPNF PLELLEKRDQ DHTICSNSSL FHPTLHMTTS STYDTICVDD  60
QKPKNQEEPN KIKQAKKGTT KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI  120
EWLLQQAEPA VIAATGTGTI PANYSSLNIS VRSARHHTTS ASNYLAHNNF GHVHHDQNYF  180
NGMGLFSSEN SFFPSGNLNV HAMLQAKEEL CDNRDQVDNN DDNIGRIKRR SEDQDLLQNH  240
QMGNLLQSST YGSIPASHQI GQNPATTLYM MTNNTSTTTN NNSSHPDTSN CSMWASPSNN  300
IDNSTIRGGL LNFMNFHQPI LETRGGGGTA AEGQWGMLTA AMNNYRQSDH ASGSNLHSGA  360
DDHHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-44	TCP family protein