PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02394.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 188aa    MW: 22001.6 Da    PI: 5.8207
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.27.2e-15511028128
         NAM  28 leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektd 120
                 +++++++  v++y   ePw+L   ++++++  yf ++++k++++  r +r++  +g+Wk +gk ++v++ +g+l+g  k L +     ++++++  + +
  PHU02394.1   5 HQAKDMMGPVNLYADkEPWELF-DITNNDTPRYFITQHNKEKEQHVRVKRTVGiNGTWKLQGKVNKVFDDEGKLMGYVKNLKYKphphHKKSSDNPNGE 102
                 45566788888876449****5.788889999******************66669****************************987765677777899* PP

         NAM 121 Wvmheyrl 128
                 W+m ey l
  PHU02394.1 103 WLMTEYLL 110
                 ******75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSSHHQAKDM MGPVNLYADK EPWELFDITN NDTPRYFITQ HNKEKEQHVR VKRTVGINGT  60
WKLQGKVNKV FDDEGKLMGY VKNLKYKPHP HHKKSSDNPN GEWLMTEYLL YDRYVDPKKI  120
KNKGFAVCKI KKKEEKHGDN KQGVNNDEDV DEYIDSVLQD EEDISIINEN NEYLEGDEVE  180
EHILAILG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.11e-07NAC family protein