PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU02106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | TCP | ||||||||
Protein Properties | Length: 242aa MW: 27486.9 Da PI: 10.1987 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 128.7 | 6e-40 | 37 | 145 | 2 | 88 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssaseceaess 78 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k aikelt++ s +++++c+++++ PHU02106.1 37 TGKKDRHSKICTAQGVRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKNAIKELTRSiplennedhrkmrkiesrdrprSEKPNKKCNQDQE 135 79**************************************************************88876666666666655555555555555544444 PP TCP 79 sssasnsssg 88 +++ +s++ PHU02106.1 136 LDETNPKSID 145 4444433333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGDQSSNPDI SRKNPTEPAM ATSSKKRKLS AKPRRRTGKK DRHSKICTAQ GVRDRRMRLS 60 LQIARKFFDL QDMLGFDKAS KTIEWLFSKS KNAIKELTRS IPLENNEDHR KMRKIESRDR 120 PRSEKPNKKC NQDQELDETN PKSIDKLGSN SSKSYLENQF ANVGIMEKYL GGASCSSITS 180 IFDYDNNGVI KGGIDNISDN YCFNNMGFLE NCTITNEVQI PFAAGNNNPS SINLNNSRFQ 240 QF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 36 | KKRKLSAKPRRR |
2 | 26 | 37 | KKRKLSAKPRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 4e-33 | TCP family protein |