PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01725.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 879aa    MW: 100552 Da    PI: 8.2336
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS288.32.1e-884898651374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetse.knsseelaalklfsevsPilkfshlt 97 
                 lve Ll+ Ae v+++ + +a +lL++ ++l+s++g+p++Rl+ yf  AL++r+ r +++e  k++   + ++ +n  + ++a ++ ++  Pi ++  ++
  PHU01725.1 489 LVERLLASAEKVEEKLFDRAINLLNECEKLSSKSGNPVERLVYYFSGALRERVDReTGKESTKSVGLHDMTDlQNALRGINACTIAVQDMPICQVVKFA 587
                 5789***************************************************778888888855555441568999999999************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                   qaI+e + ++++vHiiD++i++G+QW  L+qaL++      +    l+iT++ s   +s++++eetg+rL +fAe++++ + f+++ +++++dl+ e
  PHU01725.1 588 GIQAIVENIGNAKKVHIIDLEIKMGVQWTILMQALTTHHknsqNHLEYLKITALLSGVDQSRTNVEETGKRLMSFAESFHIALCFKIVEVEDVADLKRE 686
                 ************************************8774333334579*******9999*************************************** PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                 +L+++p+E++aV +++ + +ll ++ +l+s    ++ ++ +l+P++++v+e ea++ns+ F++rf+eal yy a+fd +e  + +++++r+ +E e++ 
  PHU01725.1 687 DLDIDPDEVIAVYSQYFMSNLLTQQEKLDS----LIGFIGGLNPRIMIVAEVEANLNSPVFANRFIEALFYYGAFFDLFEDCMKNDESTRMAMESEVMW 781
                 **********************66666666....***************************************************************** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   i+n++a eg+err rh + + Wre ++++G+ ++++s++   qak +++k++ ++ ++++ +++ l +gWk+ pL s+SaW+
  PHU01725.1 782 HGIRNIIAVEGEERRIRHVSIQLWREYFKRFGMVEIRMSNSSLYQAKVVVEKFSvGNSFTLQMNENYLAIGWKGIPLNSLSAWK 865
                 ******************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    
MAAIVSGESK KSATTFKFPH FDVVSDESDH YYVKSNQSSK DKKCFIDTNT WTYRTIMKEW  60
KILEKDLPES IYVRTYESRM DLLRAVIVGA AGTPYHDGLF FFDIVFPSDY PKQPPKVRYL  120
SRGYHMNPNL YINGYVCLSL VNTWSGTWVE RWTPRKSTIL QLLVSIQGLV LNARPYFNEP  180
GRGTHIKDER WVKASLAYNE EVFILTCKTM LSYIRTPPKN FEGFVYQYFR ERGEFILSAV  240
NAYGHGNATA GHYQVNHPPS SRVHNSAQFQ KNSKKMLVEL RNAFKKLNNS CPKLNNSSPK  300
SEVVKENKPK SGLLHIIIGF FKFIFGLRDP KVLKGSDGVT GSHKFKSWKQ PLAEMQEHKT  360
TSMQEQNEQD FVTLDDWDFD VEEETTNVVY VKETIDDNKK ARSSSIPSLN ILKDFGNGFR  420
KLKGQKINVH TSESAYAPRV CKLSTDEILR LGGQKFIQST ESSVSGLDHP FGGALFSLRD  480
EDYSRSVELV ERLLASAEKV EEKLFDRAIN LLNECEKLSS KSGNPVERLV YYFSGALRER  540
VDRETGKEST KSVGLHDMTD LQNALRGINA CTIAVQDMPI CQVVKFAGIQ AIVENIGNAK  600
KVHIIDLEIK MGVQWTILMQ ALTTHHKNSQ NHLEYLKITA LLSGVDQSRT NVEETGKRLM  660
SFAESFHIAL CFKIVEVEDV ADLKREDLDI DPDEVIAVYS QYFMSNLLTQ QEKLDSLIGF  720
IGGLNPRIMI VAEVEANLNS PVFANRFIEA LFYYGAFFDL FEDCMKNDES TRMAMESEVM  780
WHGIRNIIAV EGEERRIRHV SIQLWREYFK RFGMVEIRMS NSSLYQAKVV VEKFSVGNSF  840
TLQMNENYLA IGWKGIPLNS LSAWKFRKRN PFHGVYLTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-48GRAS family protein