PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU01094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 195aa MW: 22512 Da PI: 8.8579 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 72.9 | 2.7e-23 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i ++s rq+ f+kRr+g++KKA ELS+LCd++v v+i+s++g+l+e+ss PHU01094.1 9 KPILDNSCRQIAFCKRRKGLIKKARELSILCDVDVGVVIVSNRGRLHEFSS 59 57889999*****************************************96 PP | |||||||
2 | K-box | 37.4 | 1.1e-13 | 91 | 169 | 20 | 98 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ e Lq + R++ + + L++ +L +Le++L++ l + Rs+K++llle++++l ++ek l+eenk L+ ++ PHU01094.1 91 KYSRFMTMGELLQATERQFEETNADGLTVPDLVHLENELQTTLIQTRSRKTHLLLESVKDLHEQEKLLREENKLLEDNI 169 56777778899**************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGRKKLEIKP ILDNSCRQIA FCKRRKGLIK KARELSILCD VDVGVVIVSN RGRLHEFSST 60 NSMTGILQRY ERHVEAAKEI SPEIQVSELS KYSRFMTMGE LLQATERQFE ETNADGLTVP 120 DLVHLENELQ TTLIQTRSRK THLLLESVKD LHEQEKLLRE ENKLLEDNIA GMKKNRKVNE 180 MSDLPPQRVT LNFLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 1e-37 | MIKC_MADS family protein |