PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99491.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 105aa MW: 11932.8 Da PI: 3.4533 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.4 | 6.2e-15 | 6 | 58 | 1 | 53 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka 53 lppGf F+Ptdeelv +yLk k++ + + ++ i+++d +++Pw+L+ v++ PHT99491.1 6 LPPGFSFDPTDEELVLYYLKSKIAPNLHFNFNNIPDLDFSSSHPWELNGIVHE 58 79*********************9998777799**************853333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MMMGDLPPGF SFDPTDEELV LYYLKSKIAP NLHFNFNNIP DLDFSSSHPW ELNGIVHESK 60 NNAEGINCDD DDNDDDDGEV ELSALDEVFL SLDDDQEQDE ISFPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 7e-12 | NAC family protein |