PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99352.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 276aa    MW: 31437.9 Da    PI: 8.0046
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000145274123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  PHT99352.1 52 YTCSFCRREFRSAQALGGHMNVH 74
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MEQAKYWMSA KRKHDMILSN NHSTYGDSWE EQAFAEDAAG ALGGCVWPPR SYTCSFCRRE  60
FRSAQALGGH MNVHRRDRAR MKQSPPSNNP SGHDHQVFVP PPLTHHHHNS HLQYPSQIHT  120
FMYKPNPDSD SGAQIRVSSQ RTLATHHHSS FSSIVQEENK NKLSSPPSSW SNSVADKYSS  180
LSNVKNDDEK KLKSIDFKKD PESNLEVMID SVFRAKQDHV EETATCKRRR VEETNSISLA  240
NLFPKTSSSI ERCRPQSEAL ERIPSAIEEL DLELRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227231KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-27C2H2 family protein