PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99005.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 685aa    MW: 77709.5 Da    PI: 5.9855
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.66.3e-1153066762374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 + lL++cA+a++s d + a++lL r++e++sp+gd ++Rla+y+++AL+arl+++++ ly a+++s+ s    ++ l+a+k+f  ++P+  +s++ aN+
  PHT99005.1 306 RGLLTQCAQAMASYDSRTATELLMRIREHSSPYGDGTERLAHYLANALEARLSGTGTALYTAFASSRIS---AAQILKAYKAFITACPFKLLSNIFANK 401
                 679**********************************************************99999998...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  I + ++ge ++HiiDf+i +G+QWp+L+q L+ Rp+gpp+lRiTg++ p++g   +e++eetg+rL+k++++++vpf f++ +ak++e++++eeL+++
  PHT99005.1 402 YIRKLIAGEPKIHIIDFGILYGFQWPCLIQGLSMRPGGPPELRITGIDLPQPGfkPAERVEETGRRLEKYCKRFKVPFVFKA-IAKKWESITVEELEIQ 499
                 ****************************************************999***************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+Vn+ ++l +++de+v ++s+rd+vL+l+++++P+++++   +   n++ F++rf eal +ys+lfd++ea+lpre+e+r+  E+e+++r+++n
  PHT99005.1 500 RDEVLIVNSLYRLGNIPDETVVQNSPRDAVLDLIRRIRPDMFIHGVLNGTFNTPFFVTRFREALFHYSSLFDMFEASLPREDEDRKLFEEEVFARDAMN 598
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v+aceg+er+er et+++W+ r  +aGFk++pl+++++k+++  +r  + + ++v+e+  ++++gWk+r L+++S+W+
  PHT99005.1 599 VIACEGTERVERPETYKQWQLRCVRAGFKQLPLDQEIVKTVSNKVRSEYHKDFSVDEDGRWMLQGWKGRVLYALSCWK 676
                 ***********************************************99888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MEALFQEQLF HSPDAFIFRH SSIPMDPRND FVQNGTSTIF NNLASFDEDY PHALSNHVVG  60
EGNSSPPPQE EGEGEGDYSD AMYKFLSQML MEEDDLENKP CMFHDCMALQ ATEKYLSDVL  120
HGSENYNSPQ SVIINPQDYS SSLLSNTSPD SIESPQWNRD FESPVSVEGL SGVSNHDSLF  180
TSFGNNQFNL LYKGSEEEPA NIFQSGSSSN SPTDSRKKKN RHRGDAAADQ QRSNKQLATF  240
AHDESEPLEM YDNVLLCLNN PYVEQHSATS VTFCSPNETK KTTKVGRPKS GRKHGSNIKK  300
EVVDLRGLLT QCAQAMASYD SRTATELLMR IREHSSPYGD GTERLAHYLA NALEARLSGT  360
GTALYTAFAS SRISAAQILK AYKAFITACP FKLLSNIFAN KYIRKLIAGE PKIHIIDFGI  420
LYGFQWPCLI QGLSMRPGGP PELRITGIDL PQPGFKPAER VEETGRRLEK YCKRFKVPFV  480
FKAIAKKWES ITVEELEIQR DEVLIVNSLY RLGNIPDETV VQNSPRDAVL DLIRRIRPDM  540
FIHGVLNGTF NTPFFVTRFR EALFHYSSLF DMFEASLPRE DEDRKLFEEE VFARDAMNVI  600
ACEGTERVER PETYKQWQLR CVRAGFKQLP LDQEIVKTVS NKVRSEYHKD FSVDEDGRWM  660
LQGWKGRVLY ALSCWKPTRL SAKLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein