PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT98647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 187aa MW: 21610.9 Da PI: 10.4311 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.5 | 1.4e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+ELS+LCda++ +i+fs tgkl+eyss PHT98647.1 9 KKIDNLTARQVTFSKRRRGLFKKAQELSTLCDADIGLIVFSATGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 45 | 4.5e-16 | 77 | 172 | 3 | 98 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ ++l++++ +s ++ +a L + + re+R+l Ge+L+ L l eL++Le+ +e +++++ + K + ++++i+ l++k +lqeen +L+++ PHT98647.1 77 NNTPEQLQSSNLQSEKKTYATLSRDFVEKNRELRQLHGEELQGLGLDELMKLEKLVEGGISRVLKIKGDKFMREISSLKRKATQLQEENSQLKQQS 172 455566999*******************9****************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MVRQKIQIKK IDNLTARQVT FSKRRRGLFK KAQELSTLCD ADIGLIVFSA TGKLFEYSSS 60 SMMQLIEKHK MQSERDNNTP EQLQSSNLQS EKKTYATLSR DFVEKNRELR QLHGEELQGL 120 GLDELMKLEK LVEGGISRVL KIKGDKFMRE ISSLKRKATQ LQEENSQLKQ QSQVNYTFPF 180 CKKKSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 6e-50 | MIKC_MADS family protein |