PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMP00154

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 305aa MW: 33860.7 Da PI: 4.8891

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMP00154	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.7	1.1e-37	30	87	5	62
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 a +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk+++++ OMP00154 30 APNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRAK 87 568***************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MFTVNHNRML QCGPRPFLMD RKWKSNAEVA PNCPRCASAN TKFCYYNNYS LSQPRYFCKG 60 CRRYWTKGGS LRNVPVGGGC RKSRRAKSNR VEVDNNNNVL RTNAQNPKSL SSFGSPTDEM 120 SGASGGSPDG KSGPANGSDI DLALVFAKFL NQTTSFDQPD HDNIIVSQEL PNAGIDAWSC 180 LEQDTNSQND SSSMECQKPE ALFYSNIPES YVLQGMPQQV EENYKDCIQE LLESDDHVDG 240 FMLPNLVAVE MMMVQDALWS TTPNFECQPM VESFPGEDQL KISANLTSEN CGSYHLSGFG 300 VFSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	4e-43	Dof family protein

Link Out ? help Back to Top
Ensembl	OMP00154