PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO98813 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | FAR1 | ||||||||
Protein Properties | Length: 182aa MW: 21084.1 Da PI: 4.3688 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 58.9 | 1.7e-18 | 94 | 164 | 1 | 70 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkk 70 ++Yn+YA++ GFsvrk +++ks+++g+++ r++ C keg+r+e+ k+ + +++r+r et+++C+a+l ++k OMO98813 94 DYYNRYAYKKGFSVRKGATRKSEKDGNVIGRRLFCAKEGFRQEKFKAnEANKKRHRGETHCDCNARLLINK 164 69*****************************************98874667788999**********9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MTSINGNESS IQEGWEVDEH IYNAVEFELE KENEDHEDNE CEGEDEKDNE CEGGDEYDSE 60 NVIGNEIIVY ENEEEVSIKP HVGMVFDSEE EAYDYYNRYA YKKGFSVRKG ATRKSEKDGN 120 VIGRRLFCAK EGFRQEKFKA NEANKKRHRG ETHCDCNARL LINKVVMDPG LFLCSLKNII 180 IY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 2e-16 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO98813 |