PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO96743 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 27892.5 Da PI: 5.4623 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.6 | 8.6e-15 | 77 | 125 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 s ykGVr+++ +g++ +eIrd + + kr +lg++ t+eeAa+a+ a +++l OMO96743 77 SIYKGVRRRP-SGKFSSEIRDpF-----NkKRLWLGTYCTEEEAAAAYQAKKQEL 125 57********.7*********55.....34******************9998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MNTTQKKTVK KDSKNLPMKL RVVYNDPDET DLSSDEEHEI NHRKNQNMGC VVKKISTTSA 60 MQNHVTSGSK KPRKFSSIYK GVRRRPSGKF SSEIRDPFNK KRLWLGTYCT EEEAAAAYQA 120 KKQELAKMIM AAEEDNNNNF SQLSPSVLEH AVSSNPMVNA DRAIMKQCGE DEESIKDLWK 180 DEPSILDLLE VPLPSAFESI DQLLSPYGYE DCLSFNSVNN QGLLPKKSDG MLIDLAWVDE 240 ILNLEGN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 70 | 86 | KKPRKFSSIYKGVRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 5e-14 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO96743 |