PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO94986 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | B3 | ||||||||
Protein Properties | Length: 113aa MW: 13362.5 Da PI: 10.4091 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.6 | 1.1e-18 | 10 | 95 | 2 | 83 |
EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFk 83 f +++++ +++rlv+p + + ++ + ++ +++ d +g++W++++i r+ +++ ++++GW +Fv++n L++gD+++Fk OMO94986 10 FRKMVRPTEITNHRLVVPTEAMWAFllkvD---SNKLDIQALDVNGKTWNFRYITRRPGSHhpqPYFSRGWMKFVRDNSLQAGDTIIFK 95 57899999*****************97432...45569***************7644443368889**********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MEEEKSLEIF RKMVRPTEIT NHRLVVPTEA MWAFLLKVDS NKLDIQALDV NGKTWNFRYI 60 TRRPGSHHPQ PYFSRGWMKF VRDNSLQAGD TIIFKIRPLN DPIFFIEVAV KKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25730.1 | 3e-12 | RAV family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO94986 |