PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO91967 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | MYB_related | ||||||||
Protein Properties | Length: 246aa MW: 26405.2 Da PI: 6.4537 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.6 | 1.9e-10 | 8 | 56 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 W++eE++ + +a++++ + +W++Ia++++ ++ +++k ++q + OMO91967 8 TWSKEEEKAFENAIAMHWIEeesneQWEKIASMVP-SKSVEELKQHYQLL 56 6****************99999*************.***********965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MAAAGIVTWS KEEEKAFENA IAMHWIEEES NEQWEKIASM VPSKSVEELK QHYQLLVEDV 60 DAIEAGQVPL PSYTGEDPTS SAKDFHGFSG TSSSDKRSNS GYGNGFSGLN HDSNGHGGKG 120 SSRSDQERRK GIPWTEEEHR DRRRSSIHDI TSVNNGETSH QAPITGQHTS TNPSGAAAMG 180 PSVKHRAQPH MPGLGMYGAP VGRPVAAPGH MASAVGTPVM LPPGHHPPPP YIVPVAYPMA 240 PPPMHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49010.1 | 2e-47 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO91967 |