PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO87914
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family Dof
Protein Properties Length: 281aa    MW: 30828 Da    PI: 8.9193
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO87914genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.96.1e-401879263
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
              k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  OMO87914 18 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 79
              7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEAAASRPLV ERRARPQKDQ ALNCPRCNST NTKFCYYNNY SLSQPRYFCK TCRRYWTEGG  60
SLRNVPVGGG SRKNKRSSSS TTSSPANSSK IKLADQVTPP ILSNSSSHQN PKIHEGQDLN  120
LAYPPPADHQ DYNNLSKFME VPYNKSNQPN STSSSTSTHH HLNAMELLKS SGISSRGLMS  180
SFMAMAPVSD SNTVFSSSGF PMQDFKPTLN FSLDGFETGY GNLQVQGVEE SGARLLFPME  240
ELKQQVPSTN ELDQQNRGQG DSSTGFWSSN GMLGGSGGHW S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46590.12e-47Dof family protein