PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO87589
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ZF-HD
Protein Properties Length: 296aa    MW: 32462.3 Da    PI: 8.5859
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO87589genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.36.8e-3289146260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vrY+eClkNhAa++Gg+++DGCgEfmp  geegt +alkCaAC+CHRnFHR+ev+ e
     OMO87589  89 SSVRYRECLKNHAANIGGNVYDGCGEFMPC-GEEGTLEALKCAACDCHRNFHRKEVDGE 146
                  579**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEVRGQEHDI KPPAGSSGFG HHSPGAERRR DGNHNGSAVL TCTQTLDHVH RPQRQQSFGQ  60
GRSPHHPDRV SGAAVAPISV GSNAAKPTSS VRYRECLKNH AANIGGNVYD GCGEFMPCGE  120
EGTLEALKCA ACDCHRNFHR KEVDGETQFG GNSSRRSLML NPLQLPPPLP SPTMMHHHQK  180
YSSPSSAMVA PMNVAFGSGG GGGGTESSSE DLNVFQSNAD GMPPPPPYVL SKKRFRTKFT  240
QEQKDKMLEF AEKVGWRINK QDEEEVEKFC AEVGVKRQVF KVWMHNNKNV KKPPQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.13e-68ZF-HD family protein