PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO87193 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GRAS | ||||||||
Protein Properties | Length: 425aa MW: 47867.1 Da PI: 5.4731 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 306.5 | 6.1e-94 | 49 | 424 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103 +lL ecA+a+s++d +++++lL+ l+elasp+gd q+la+yf++AL + ++s++++yk+l++ ++++++ +++ + f+evsP+ +f+h++aN a+l OMO87193 49 RLLRECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLKALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVAANGALL 149 7899**********************************************************9999985554444444445******************** PP GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpgEala 203 ea++ge ++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+ ++ + ++e+ +r++kfA+ +gvpfefnv+ +rl +l+ e+L v ++Ea+a OMO87193 150 EALDGEPKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVT-ANIVRSVMKEISQRMEKFARLMGVPFEFNVIsGLNRLGELTKEALGVVEDEAVA 249 **********************************************.667999************************95567******************* PP GRAS 204 VnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse..sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302 +n++ +l rl +e+ r v+++++sl Pkvv+vve+ead +s+ +F++ f e+l++y+ f++l+++++++s+e+ ++Ere +r+iv v+ac + OMO87193 250 INCIGALGRLA-----VEE-RGGVIQMFQSLGPKVVTVVEEEADFSSTpyDFVRCFEECLRFYTLYFEMLDESFAPTSNEKLMLERE-CSRSIVRVLACDE 343 **********8.....444.889**********************776458************************************.89*********87 PP GRAS 303 a........errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374 + er+e+ ++W++rl+e+ F+p+ +s+++++++k+ll+++ g+ + +++ l+l+Wk++++v++SaW+ OMO87193 344 EledystsgGECERRERGSQWSDRLKEV-FSPIGFSDDVVDDVKALLKRYR-AGWALAqphQDETGLYLTWKEEAVVWASAWK 424 5222222222479*************98.*********************9.7777775557799999**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MHNTTNHHHL NHQQQQQQQQ TQNSHTSTSR SSDSGAGEPC ATGNKWASRL LRECARAISD 60 KDSSKIHHLL WMLNELASPY GDCDQKLASY FLKALFCKAT ESGQRCYKTL TSVAEKSHSF 120 DSARKLILKF QEVSPWTTFG HVAANGALLE ALDGEPKLHI IDISNTLCTQ WPTLLEALAT 180 RNDDTPHLKL TVVVTANIVR SVMKEISQRM EKFARLMGVP FEFNVISGLN RLGELTKEAL 240 GVVEDEAVAI NCIGALGRLA VEERGGVIQM FQSLGPKVVT VVEEEADFSS TPYDFVRCFE 300 ECLRFYTLYF EMLDESFAPT SNEKLMLERE CSRSIVRVLA CDEELEDYST SGGECERRER 360 GSQWSDRLKE VFSPIGFSDD VVDDVKALLK RYRAGWALAQ PHQDETGLYL TWKEEAVVWA 420 SAWKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 1e-139 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO87193 |