PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO82656 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 238aa MW: 27353.3 Da PI: 8.3796 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.4 | 6.2e-14 | 117 | 221 | 1 | 96 |
EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SS.SEE. CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgr.sefe 91 f+k+lt sdv ++ +rl+l k +++ + +++e++ ++++d++g+++ +++i + +s+ +vl++GW +F++++gL Dfv++ + ++ +++ OMO82656 117 FEKQLTESDVKSNqCRLSLNKIDVQNAvnpllkeEDDPTEGIPVKVYDSNGKEYPMTFITW-CSKIHVLKEGWINFCNDHGLVaYQDFVTLWVFRNkKTGG 216 99*********999**********555******988999*******************655.55689***************9668999998766656666 PP .EEEE CS B3 92 lvvkv 96 l++ + OMO82656 217 LCFVI 221 66655 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MENSKGNEDG YSEECRDFYL AALRLCSFKL EKISNETVKK LHELKTKYSF GEKEEAKSNE 60 PKTPEKSNPA EEIRRLNSAK NWSETPKFRL SLSSNFPPEM PPVACLKGLI GNCSKPFEKQ 120 LTESDVKSNQ CRLSLNKIDV QNAVNPLLKE EDDPTEGIPV KVYDSNGKEY PMTFITWCSK 180 IHVLKEGWIN FCNDHGLVAY QDFVTLWVFR NKKTGGLCFV ITSRRLEVFE AIKRRKLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G03170.1 | 2e-25 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO82656 |