PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO82574

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 303aa MW: 33598.1 Da PI: 6.2289

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO82574	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.1	3.4e-37	23	77	7	61
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ OMO82574 23 NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 77 8***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MLCRSRNLVM ERGWKPSVEI SPNCPRCGSS NTKFCYYNNY SLTQPRYFCK GCRRYWTKGG 60 SLRNVPVGGG CRKNRRGKSL RLPISDHHVK GLSCNVVPSD PMGHSYGNNN KVMNNNASSA 120 ESDSSSGSHI DLALVYANFL NQQPENNKSG LEVPELPSPT EFDPSLEFSS LSNSNMDSSI 180 QIPEENGLMG CLTRSDLSTE NNHLSNNDQI YYSGLESVSV QKHQDRSVLH ETSNYPLLPP 240 LPGDELSQEI LWSNSNSHSS VVMSQALQAT QEPVLGPETH DPNLLFGNWS PFDLSSDDTF 300 SRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	4e-47	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO82574