PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO78882 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 152aa MW: 17131.1 Da PI: 9.9366 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g OMO78882 28 PFRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPIAAARAYDTAVFYLRG 77 69*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MEGDCCSTSS STTSGEKRKQ RRQQKDKPFR GIRMRKWGKW VAEIREPNKR SRIWLGSYTT 60 PIAAARAYDT AVFYLRGPSA RLNFPDLILQ EDDLRDISAA SIRKKATEVG AKVDALQTSL 120 HASTSSESNS NTSRVFDKPP DLNKYPESSD ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46768.1 | 3e-51 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO78882 |