PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO76335

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

VOZ

Protein Properties

Length: 483aa MW: 53508 Da PI: 5.9258

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO76335	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	437.3	2e-134	207	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsll 101 pppsaflgpkcalwdc+rpaqg + +qdycssfha+la+neg+pg+ pvlrp+gi+lkdgllf+alsak+qgk+vgipecegaatakspwna+elfdls+l OMO76335 207 PPPSAFLGPKCALWDCPRPAQGLDGCQDYCSSFHAALAMNEGPPGMGPVLRPGGIGLKDGLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVL 307 89************************************************************************************************* PP VOZ 102 egetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvsk 202 +getirewlffdkprrafesgnrkqrslpdysgrgwhesrkq+m+efgglkrsyymdpqp+++fewhlyeyein++d +alyrlelklvd+kksakgk ++ OMO76335 308 DGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQIMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDVCALYRLELKLVDGKKSAKGKSAN 408 ************************************************************************************************* PP VOZ 203 dsladlqkklgrlta 217 d++adlqk++grlta OMO76335 409 DTVADLQKQMGRLTA 423 ***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MGKGSKSNCK SSSHKLFKDR AKNRVDDLQG MFLDLQFARK ESRSIDVAVL EEQVHQMLRE 60 WKAELNEPSP ATSLQHGGSL GTFSSDICRL LQLCEEEDDA TSALAAPKPE PNDQNLQVGD 120 HAAFQEGYGV NQGQHERGFA LADHCKDSPS GIRTMSINNL EGAAQLEYHQ FDLHQEFEQF 180 YNGFNGTGFC GEDALPHTSS YLPSICPPPS AFLGPKCALW DCPRPAQGLD GCQDYCSSFH 240 AALAMNEGPP GMGPVLRPGG IGLKDGLLFS ALSAKAQGKD VGIPECEGAA TAKSPWNAPE 300 LFDLSVLDGE TIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQI MNEFGGLKRS 360 YYMDPQPLNH FEWHLYEYEI NKCDVCALYR LELKLVDGKK SAKGKSANDT VADLQKQMGR 420 LTAEFPSDNK RYVKGRAKIN AKVGVGNLYS TPNVVAPTSE KFDYGLGVQY DYLVDNLSGY 480 YLT

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MGKGSKSNCK SSSHKLFKDR AKNRVDDLQG MFLDLQFARK ESRSIDVAVL EEQVHQMLRE  60
WKAELNEPSP ATSLQHGGSL GTFSSDICRL LQLCEEEDDA TSALAAPKPE PNDQNLQVGD  120
HAAFQEGYGV NQGQHERGFA LADHCKDSPS GIRTMSINNL EGAAQLEYHQ FDLHQEFEQF  180
YNGFNGTGFC GEDALPHTSS YLPSICPPPS AFLGPKCALW DCPRPAQGLD GCQDYCSSFH  240
AALAMNEGPP GMGPVLRPGG IGLKDGLLFS ALSAKAQGKD VGIPECEGAA TAKSPWNAPE  300
LFDLSVLDGE TIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQI MNEFGGLKRS  360
YYMDPQPLNH FEWHLYEYEI NKCDVCALYR LELKLVDGKK SAKGKSANDT VADLQKQMGR  420
LTAEFPSDNK RYVKGRAKIN AKVGVGNLYS TPNVVAPTSE KFDYGLGVQY DYLVDNLSGY  480
YLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein

Link Out ? help Back to Top
Ensembl	OMO76335