PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO75237 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 238aa MW: 26873.7 Da PI: 10.3349 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 78 | 1.3e-24 | 38 | 89 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +rYkeC++Nh + G +a+DGCgEfm+s ++ + kCaACgCHRnFHR+e+ OMO75237 38 LCRYKECKRNHGIPFGRYAFDGCGEFMKS----SDEDPYKCAACGCHRNFHRKEPC 89 589*************************9....5668****************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MERLERGRDG RLKGKGPIFE PVSLIHRCCS HVRAEAELCR YKECKRNHGI PFGRYAFDGC 60 GEFMKSSDED PYKCAACGCH RNFHRKEPCP ADTPQNNRNN SVTLAPPTQA PTPEKEQFMS 120 PLPLATLNGN TGESSSFPRV DKNLDAGSET QSGVGVGVRA GLGVQKGMKI KRTRTRFTLE 180 QKQKMTRFAV DRLGWRLHRT DETDVLNLCK DLGISRHVFV VWMNNTRRRI RNKRAGTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69600.1 | 8e-37 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO75237 |