PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO74372 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | SRS | ||||||||
Protein Properties | Length: 223aa MW: 24644.5 Da PI: 8.6568 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 187 | 7e-58 | 12 | 147 | 4 | 153 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaas.skaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103 g+++CqdCGnq+kkdC+++RCRtCC+s+gf+C+th+kstWvpa++rr+r+ q+ ++ +++ ++++kr r ++ +s++ le+ OMO74372 12 GGTRCQDCGNQSKKDCSYMRCRTCCRSKGFECQTHIKSTWVPAYRRRHRHPQQLSSVpQQQLLPLPHHNPKRLR---------------ENPSSPTGLEVG 97 7789*********************************************6555444302222222333333333...............344567789999 PP DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++P+ev s+a frcvrvss+dd+++++aYqtav+igGhvfkGiLydqG+e OMO74372 98 DFPAEVTSPATFRCVRVSSIDDADDQYAYQTAVNIGGHVFKGILYDQGPE 147 9***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MMMRQGGGGG FGGTRCQDCG NQSKKDCSYM RCRTCCRSKG FECQTHIKST WVPAYRRRHR 60 HPQQLSSVPQ QQLLPLPHHN PKRLRENPSS PTGLEVGDFP AEVTSPATFR CVRVSSIDDA 120 DDQYAYQTAV NIGGHVFKGI LYDQGPEGGG HHHHRSVGEC SSRETHQQQP NHHQFNVAAL 180 TTTATTTTNT SSVAAETLLP FPYASPFNAF MSAGTQFFLH PKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 9e-46 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO74372 |