PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO70861

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 264aa MW: 28242 Da PI: 8.281

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO70861	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.4	4.4e-40	17	77	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s OMO70861 17 EQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNIPVGGGTRKNAKRS 77 57899****************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MQDPTGFQQM KVPGFPEQEQ LKCPRCDSSN TKFCYYNNYN LSQPRHFCKS CRRYWTKGGA 60 LRNIPVGGGT RKNAKRSSSS SSSSSANNSS SKRQPNPAPD PTQTQKLPDH PSPPPPTTSS 120 VIPQQVVLNA GVQNQNSCPD ADPTRTYGLS VDHHHQERKM MDIGISGSFS SLLASGGQFG 180 NLLEGLNHPN GSGMKTVQMG DFGGNLDSGR GMDQISGRDS GMGESNNNGE TYLGVQGGGD 240 ASCWTGSSNG WPDLAIYTPG SSFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	9e-37	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO70861