PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO69226 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | SBP | ||||||||
Protein Properties | Length: 113aa MW: 12597.4 Da PI: 8.2128 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 63.5 | 5e-20 | 1 | 49 | 4 | 52 |
STT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEET CS SBP 4 vegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhel 52 veg + dls+a++yhr ++vCe hsk+p+v++s le+rfCqqCsr l OMO69226 1 VEGSNLDLSSARDYHREYRVCESHSKSPKVILSALERRFCQQCSRIQLL 49 78999****************************************9776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
VEGSNLDLSS ARDYHREYRV CESHSKSPKV ILSALERRFC QQCSRIQLLH LQSLLLKVLV 60 PFLAPSCISW ITDYGAQKDS SSPPTLDSDY RRGSLTPGVL KESGPSFCTL VVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 2e-20 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO69226 |