PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO68007 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | FAR1 | ||||||||
Protein Properties | Length: 261aa MW: 29714.6 Da PI: 7.3035 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89.9 | 3.4e-28 | 96 | 183 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++ ++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p OMO68007 96 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDMRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHALTP 183 ******************************************9988..9**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MPMLILWSFS SKKVFLAVEF GVDGDVNGGF VVEVEASSID NDNEAGENLV EGTYQQGLNE 60 KMERISPDVG DIPEGIPADE PYVGQEFESE AAAHAFYNAY ATRVGFIIRV SKLSRSRRDG 120 SAIGRALVCN KEGFRMPDMR EKIVRQRAET RVGCRAMILV RKVSSGKWVV TKFVKEHTHA 180 LTPGKGRRDC IYDQYPNEHN KIRELTQQLA NEKKRAATYK RHLELIFEQI EEHNQSLSKK 240 IHHIVESVRE IENKEQQQSH V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-101 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO68007 |