PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO67732 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WOX | ||||||||
Protein Properties | Length: 261aa MW: 29319.8 Da PI: 8.0218 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.9 | 2.2e-20 | 19 | 78 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le+l+++ r+psae++++++++l ++ ++V++WFqN++a++++ OMO67732 19 SRWNPTKEQINMLENLYRQgIRTPSAEQIQHITSRLkvygTIEGKNVFYWFQNHKARQRQ 78 7*****************99****************99999*****************97 PP | |||||||
2 | Wus_type_Homeobox | 112.3 | 2.5e-36 | 18 | 80 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi++Le+ly++G+rtP++e+iq+it++L+ yG ie+kNVfyWFQN+kaR+rqkq OMO67732 18 NSRWNPTKEQINMLENLYRQGIRTPSAEQIQHITSRLKVYGTIEGKNVFYWFQNHKARQRQKQ 80 79***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MEGGGNMDMA GSGGTTGNSR WNPTKEQINM LENLYRQGIR TPSAEQIQHI TSRLKVYGTI 60 EGKNVFYWFQ NHKARQRQKQ KQENMAYINR YLHRTTQPIY PPPLPPAAAA GTNVVCRPYF 120 LAQSDHHHLG LYSHCPKVII PGGIKRRGRP EKMEMARVYE TTSAPSYDHM FHQDYNMMIP 180 ADRIENYGVR VKNDETLALF PLHPTGIIEG RATNNISSNT FSGNSASSCE TTAGIDQEAA 240 SATEQPFFDF FSSHQGSCES D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 8e-52 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO67732 |