PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO65603
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GeBP
Protein Properties Length: 265aa    MW: 30563.9 Da    PI: 8.7409
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO65603genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57335.62.5e-111461974697
    DUF573  46 sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               +++ +k  l +K+ rLK K+++  k+ k+gk+p+fsk hd+k++elsk i g
  OMO65603 146 KSNDNKAKLADKLMRLKIKYENLAKRCKNGKDPVFSKLHDKKSYELSKEILG 197
               56668999****************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MITLIWRCSQ WRWQDFDLRG PNEHYIEDCS SHPWNESTLS QAKILILPLE NKNNNPNKVN  60
EIKGFQEEDD PKTETKNSGG GDSDGNSDSD SGIAAKPTEE PKSTKRKKMK SKAEASANRV  120
RESELQLKKS IWAKRDVVEE EEIVLKSNDN KAKLADKLMR LKIKYENLAK RCKNGKDPVF  180
SKLHDKKSYE LSKEILGKWA NDFRVDMDSE GLNLFDNKFG SGMVYFNGIE EMILKKSMEV  240
LKGEQRAVME RKLMKLKVVE LELYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-06GeBP family protein