PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO64467 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | C2H2 | ||||||||
Protein Properties | Length: 260aa MW: 27322.3 Da PI: 8.5061 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00019 | 97 | 119 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k Fs+ L H +H OMO64467 97 YKCSVCNKAFSSYQALGGHKASH 119 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MALETLNSPT AATAPFHFED TNLHCLESFT KRKRSKRPRF DHVPTEEEYL ALCLIMLARG 60 GAGAASASTS TIPHRHRSPT PPTAPPPAPT SEPKLSYKCS VCNKAFSSYQ ALGGHKASHR 120 KLAGGNDDQS TSTTTSATAG GTTSAASNPS GRSHECSICH KSFPTGQALG GHKRCHYEGG 180 ANGHNANANA NTSASAVTSS EGVGSTNTVS QLSQRGFDLN LPALPEFSPA LFVSGADDEV 240 ESPHPNKKPR HLILPKIEVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 3e-55 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO64467 |