PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO60795
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ZF-HD
Protein Properties Length: 295aa    MW: 33723.4 Da    PI: 8.5712
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO60795genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer67.81.9e-21255257
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                 ek+ Y++C++NhA + Gg+a+DGC+ f+ps++    +   +C  CgCHRn+HR+ +
     OMO60795  2 EKAIYRDCQRNHACNFGGYAIDGCRHFIPSNTIG--MGIHHCKSCGCHRNYHRKLT 55
                 5789**************************5555..88899************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MEKAIYRDCQ RNHACNFGGY AIDGCRHFIP SNTIGMGIHH CKSCGCHRNY HRKLTFTELS  60
SENAAIKSSF WSLREAKRIA RQRCVVLPGT GTPSSSMAAG GCKVKKRKSK FSKGQKEAMR  120
EFAESLGWSM RNKEDRDFPY DFATLCLHNS MNVSFQDREE EVEVRDHKGD MDLHHNNNAI  180
EFDIEFWPVE HPMEPPDEDR PVKCPMPASS SINIDRKSFE ESSRKRSEVP EMAARGVAVA  240
TAPPVRAVRK RHHHTLTPVD DHIMKPLVRM PPLPPLPTQN LTIFQMLQEF DKFNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.16e-16ZF-HD family protein