PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO60494 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NF-YC | ||||||||
Protein Properties | Length: 143aa MW: 16081.4 Da PI: 10.2699 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 47.5 | 4.1e-15 | 8 | 92 | 15 | 98 |
NF-YC 15 dfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 d + e+P r+kki+k d+d++++ +ea l+s + +lf+ l+ rs a e+k++t+k + +av+r + dfl+d p OMO60494 8 DPVQPEFPRGRVKKIMKLDKDINKVNSEALLLISCSTNLFLQFLAERSAEVATEKKKKTVKLDHLRTAVKRHRpTSDFLLDSLPM 92 556789***************************************************************9975489*****9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MAEDEAVDPV QPEFPRGRVK KIMKLDKDIN KVNSEALLLI SCSTNLFLQF LAERSAEVAT 60 EKKKKTVKLD HLRTAVKRHR PTSDFLLDSL PMPSEPTQSV ARTVADRDRS RPVSDKPAPA 120 GTRRIDQFFR KTGNEAPVQI NDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 6e-45 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO60494 |