PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO58742 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 66aa MW: 7773.98 Da PI: 10.3069 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 37.8 | 6.2e-12 | 26 | 66 | 1 | 41 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkr 41 ++Y++YA++ GFsvrk ++kks+++g+++ r++ C keg+r OMO58742 26 DYYKRYAYQKGFSVRKGATKKSEKDGNVIGRRLFCAKEGFR 66 69*************************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 66 aa Download sequence |
MTTMNGKDKM TKTMNVKEEM KEEAYDYYKR YAYQKGFSVR KGATKKSEKD GNVIGRRLFC 60 AKEGFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06250.1 | 8e-11 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO58742 |