PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO56588 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | MYB_related | ||||||||
Protein Properties | Length: 211aa MW: 22684.2 Da PI: 4.867 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.2e-14 | 5 | 40 | 1 | 37 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 +g+W++eEd+ll ++v+++G+++W++I++ ++ gR++ OMO56588 5 KGPWSPEEDDLLQQLVQKHGPRNWSLISKSIP-GRSE 40 79******************************.**95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MDRIKGPWSP EEDDLLQQLV QKHGPRNWSL ISKSIPGRSE CNFISNGGYD GNLGGDERPP 60 LKRSVSAGLY MSPGSPSGSD VSDSSVPVSS SHVYKPIART GGVNVDVNVM PAGLEATSSS 120 NDPPTSLSLS LPGVESCEVS THPTVTTEST QTRNEGKNEE RGSGVMGFSA EFMAVMQEMI 180 RVEVRNYMMQ MQQQNGSVGG VRNGDMFGWR V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-30 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO56588 |