PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO56240 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 250aa MW: 27896.1 Da PI: 7.6661 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 101.4 | 6e-32 | 49 | 103 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 k rY+eClkNhA+ lGghavDGCgEfm++ g++gt +alkCaAC+CHRnFHR+e+e OMO56240 49 KPRYRECLKNHAVGLGGHAVDGCGEFMAA-GADGTLDALKCAACNCHRNFHRKESE 103 779*************************9.999********************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEFEDQEEQD EEMGLAPSYD SLGNPSRVKM SGVEPGSITP TGQQQQQRKP RYRECLKNHA 60 VGLGGHAVDG CGEFMAAGAD GTLDALKCAA CNCHRNFHRK ESELGSPNSV PTTDLYFHHH 120 HQPPQFAPYF RAPAGYLHVA GQQRPLALPS TSGGGGGHSR EDQEDVSNQG SSRKRFRTKF 180 TQEQKEKMLA LAERLGWRIQ KHDEAAVQQF CNETGVKRHV LKVWMHNNKH TLDMAALKQS 240 GNMQMQFKEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 4e-71 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO56240 |