PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91264.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1180aa MW: 129782 Da PI: 4.034

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.1	2.9e-10	381	453	2	67
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 W+ ++ laLi+arr+ + +l+++ k+ W +v + + + g+ r +C +kw+nl + +kk+ + GBG91264.1 381 WSVEHMLALIRARRDQDAQLQASGhnfarmrMKEWNWMDVREWLLKVGVDRPTDKCGKKWDNLMQHFKKVHAF 453 9**************9999863334444499999999****************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1180 aa Download sequence
MADVFRTLPL LLLVVILLVV VVFVHVCILW RLPSHSRRKV GARKSVALDG RRPTQRTLSG 60 PYPTDRAPIC VGADRRAAGP SPYEGLLPHL QPLPDSDEGE AEVDVSTTVP LGSGSTQEWM 120 GSQLYDRRGT KYGQSFTSLL HDDAEEEDCL PPVDLTFGLR SGSPSSVTRT VLVNPHPDDD 180 MGQVTFGARG TRGVEAAEVT SGKTTAWPRT QATSGPLVPH TVGQRPEWMT LNPPLSGRRD 240 GVRRPVDRAV THEDFPSEGA HGDGRRVWKD VRQELRRQQE ESITKGVERL RVGERSGQAD 300 VAAGGGDAWA NADEVRCDVD DDDSGDVFPL RAPNMGGRGG RGGRGGRGST STRAVRRWTR 360 SMTASTDAEG EGDGEGGRNF WSVEHMLALI RARRDQDAQL QASGHNFARM RMKEWNWMDV 420 REWLLKVGVD RPTDKCGKKW DNLMQHFKKV HAFMGMSGKE DFFELSSQQR AEKGFNFNMD 480 RAVFEEIKGE RERSHTISPT NVADTGGAGG VQLPFAQSAT PESVGDGEAV GDGNDEDDSS 540 ARGGSQTSGG PAGIGKRKNV QQQTFEAMSE CMDKHGALMA STMESASGRQ CETMESASKR 600 QCSIQIRQCE AIEAEVEIQK QHCDASSGTS DKGGGGNGDC SKQAPAPRVQ RAKDVAAAGA 660 IAGTSTGGAG GGGGDGRDGD DDDDPLINRQ RRTGGMAAME TKARLWVDDH CFWNETEGHG 720 MVKMIQETRL HLLAIAKGVK PPEIRKSIVL PNSTIPLQKM EDESELQAAK ERAGRVQTIA 780 LRIIHGWLFK SPNCARGYHC AYRYVLNHVA TDLDRTIWLG EEWRVCVSPA VVHNTLEARM 840 KLPIWYVGGI IHDRHEDDEM ASYQESTMQR LVGAFTNAVD VGEGVDGGRI SYERLRNIAD 900 CMRLLLSAAM WIMRMAGDWI GWAPDHPRLT TKRRRRQTRG RRERWSRTAC GDDGDADDGD 960 DDGDDDDEDG DVQSLQTNDA DDEDDADDDD DGADDDDEDD DDNEDGDDDE HDNDDDDDDD 1020 DDDDDDDDDD DDDDDDDDGD DGDDDDDDDD DDDDDDDDDD DDDDGDDDDK DDDDDDDDGD 1080 DDDDEDDDDD DDDDDDDDND DDDDVDDGDD DDDDDDDDAD DDDDGDDDDD EDDDADDDDD 1140 DDDDGADGRV RWSSTVRTGA HTRRCQIPRA FRNPAQCSFF

Sequence ? help Back to Top

Protein Sequence Length: 1180 aa Download sequence

MADVFRTLPL LLLVVILLVV VVFVHVCILW RLPSHSRRKV GARKSVALDG RRPTQRTLSG  60
PYPTDRAPIC VGADRRAAGP SPYEGLLPHL QPLPDSDEGE AEVDVSTTVP LGSGSTQEWM  120
GSQLYDRRGT KYGQSFTSLL HDDAEEEDCL PPVDLTFGLR SGSPSSVTRT VLVNPHPDDD  180
MGQVTFGARG TRGVEAAEVT SGKTTAWPRT QATSGPLVPH TVGQRPEWMT LNPPLSGRRD  240
GVRRPVDRAV THEDFPSEGA HGDGRRVWKD VRQELRRQQE ESITKGVERL RVGERSGQAD  300
VAAGGGDAWA NADEVRCDVD DDDSGDVFPL RAPNMGGRGG RGGRGGRGST STRAVRRWTR  360
SMTASTDAEG EGDGEGGRNF WSVEHMLALI RARRDQDAQL QASGHNFARM RMKEWNWMDV  420
REWLLKVGVD RPTDKCGKKW DNLMQHFKKV HAFMGMSGKE DFFELSSQQR AEKGFNFNMD  480
RAVFEEIKGE RERSHTISPT NVADTGGAGG VQLPFAQSAT PESVGDGEAV GDGNDEDDSS  540
ARGGSQTSGG PAGIGKRKNV QQQTFEAMSE CMDKHGALMA STMESASGRQ CETMESASKR  600
QCSIQIRQCE AIEAEVEIQK QHCDASSGTS DKGGGGNGDC SKQAPAPRVQ RAKDVAAAGA  660
IAGTSTGGAG GGGGDGRDGD DDDDPLINRQ RRTGGMAAME TKARLWVDDH CFWNETEGHG  720
MVKMIQETRL HLLAIAKGVK PPEIRKSIVL PNSTIPLQKM EDESELQAAK ERAGRVQTIA  780
LRIIHGWLFK SPNCARGYHC AYRYVLNHVA TDLDRTIWLG EEWRVCVSPA VVHNTLEARM  840
KLPIWYVGGI IHDRHEDDEM ASYQESTMQR LVGAFTNAVD VGEGVDGGRI SYERLRNIAD  900
CMRLLLSAAM WIMRMAGDWI GWAPDHPRLT TKRRRRQTRG RRERWSRTAC GDDGDADDGD  960
DDGDDDDEDG DVQSLQTNDA DDEDDADDDD DGADDDDEDD DDNEDGDDDE HDNDDDDDDD  1020
DDDDDDDDDD DDDDDDDDGD DGDDDDDDDD DDDDDDDDDD DDDDGDDDDK DDDDDDDDGD  1080
DDDDEDDDDD DDDDDDDDND DDDDVDDGDD DDDDDDDDAD DDDDGDDDDD EDDDADDDDD  1140
DDDDGADGRV RWSSTVRTGA HTRRCQIPRA FRNPAQCSFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	4e-07	Trihelix family protein