PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG87490.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 346aa    MW: 37923.3 Da    PI: 9.6642
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG87490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.71.1e-11186257165
    trihelix   1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 
                 rW ++e+ +L +ar+       e  e+++rg++k++ W+ v ++m+erg++r  +qCk k++++   y+ +k
  GBG87490.1 186 RWGEEETTVLCQARNeaktflgEETEAMGRGRAKAGFWKVVEDRMWERGYNRDHEQCKGKFSQVLDFYQCLK 257
                 8**************77777777777777899******************************9988887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MVEGQPRGAF VVGGGQVLHQ SPHVAKARTA SPTTSPLTSI DCGKEPSRSF NRGSSTPSPM  60
LPRPGVRDRA TPQSESSNVH SSVQHSLGSD YIINRLVSDI EAGVFPTDGP VEVGGGGSHN  120
MTAAARLSPR PPTPGSGNVN VVILVAVVGG SSNSPSNIAG GGGSSVGERA ERGRRRPPNT  180
PKNMDRWGEE ETTVLCQARN EAKTFLGEET EAMGRGRAKA GFWKVVEDRM WERGYNRDHE  240
QCKGKFSQVL DFYQCLKIQE GWSGLPSYWD MNQMKRKRYN FDFVIRRAWF DTINVVEKDN  300
DSINLSHLRD SGAKHEWREE GNHGAGGAMR RRMLARTWVE DPKVAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-06Trihelix family protein