PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85591.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family SRS
Protein Properties Length: 312aa    MW: 33064.2 Da    PI: 8.4946
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702160.21.3e-49572166153
      DUF702   6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletss 104
                 ++Cq+CGn+ak+dC+++RCRtCCksrgf C thvkstWvpaakrre+q+++a  ++++  +  ++ +k +r+++s+  + +sst l+s++ + +l +  
  GBG85591.1  57 MACQECGNRAKRDCNYNRCRTCCKSRGFVCPTHVKSTWVPAAKRREKQRAEAINHTNSPDHLLASLEKVNRSSSSSLPTCSSSTILTSSQGRPSLLALG 155
                 79***************************************************9999999999999999999877776666666665555444443333 PP

      DUF702 105 ............lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                             lP+e+ ++ + ++v+++++ dg  e++Y+++ +igG vfkG+L++ G++
  GBG85591.1 156 papgvggnkvssLPSEITAHTLLKSVKMTGIVDGVLEVGYHASTKIGGQVFKGVLFNAGPD 216
                 688999999999***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MISSGKRLFP YEHHPLDSDF LTENGTAMEQ PPSQLKVVPA GSGGTTASLR EDQPTPMACQ  60
ECGNRAKRDC NYNRCRTCCK SRGFVCPTHV KSTWVPAAKR REKQRAEAIN HTNSPDHLLA  120
SLEKVNRSSS SSLPTCSSST ILTSSQGRPS LLALGPAPGV GGNKVSSLPS EITAHTLLKS  180
VKMTGIVDGV LEVGYHASTK IGGQVFKGVL FNAGPDTCCA SNSDSHPALT DPSLLALKSA  240
PSAALLESTG LYGHNLALLG SHLKREDNPA TAAGVQSMVR SLLSREYWDN SGQCGVWGHH  300
HATNAKYTGD ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.13e-26SRS family protein