PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83034.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 299aa    MW: 33474.6 Da    PI: 6.2452
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.25.6e-1042115268
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+ +  ++L++ +r        ++++++r + k+ +W++++k+m+  g  + +  C +kw+nl + yk+i++ +
  GBG83034.1  42 WSPEDQMLLVRCKReeemhlaGLGHNYGRMRTKEWKWDDIAKRMANAGRPKDADDCMKKWDNLFQNYKNIQRFQ 115
                 8888888899998833333334445555789*************************************998755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MTTTFLFGLW GRPVRGGKDA AEVLFVVDPL VVAAEVESAT YWSPEDQMLL VRCKREEEMH  60
LAGLGHNYGR MRTKEWKWDD IAKRMANAGR PKDADDCMKK WDNLFQNYKN IQRFQNPSGQ  120
ADFFRLSNEE RKEHNFKFRM ERVLYNEIHA GILGSHTIFP PNITDTGSPN GVQLPRRGAV  180
GGEYVGSEAG GDDCPEERSS ARDSDNNAGS GVGGGKRKNA RQQALESIAD VMDHHGELMS  240
ATIDSSSKQQ CSIFTRQCDI LEQEVVVQKP HYAASDETQR MMCHTLMEIT AAIGGRSPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-06Trihelix family protein